BEAST 2 is a cross-platform program for Bayesian phylogenetic analysis of molecular sequences. It estimates rooted, time-measured phylogenies using strict or relaxed molecular clock models. It can be used as a method of reconstructing phylogenies but is also a framework for testing evolutionary hypotheses without conditioning on a single tree topology. BEAST 2 uses Markov chain Monte Carlo (MCMC) to average over tree space, so that each tree is weighted proportional to its posterior probability. BEAST 2 includes a graphical user-interface for setting up standard analyses and a suit of programs for analysing the results.
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- DOWNLOAD BEAST 2.07 (updated link) BEAST is a Windows -based backdoor trojan horse, more commonly known in the underground hacking community as a Remote Administration Tool or RAT. It is capable of infecting versions of Windows from 95 to XP. Written in Delphi and released first by its author Tataye in 2002, it became quite popular due to its.
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The latest version of BEAST 2 is version 2.6.5. To install this version, first installBEAST v2.6.4 byselecting one of the following to download the version for your operating system:
- Download for Windows without java (8MB) /with java (45MB)
- Download for Mac OS X without java (8MB) /with java (46MB)
- Download for Linux without java (8MB) /with java (47MB)
After this, or if you already have v2.6.X (X=0, 1 or 2) installed, you can upgrade via the package manager.
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If you download a version of BEAST without Java, you need to install Java separately (for OS X, JDK 8 is recommended). BEAST requires Java version 8 or higher.Older versions are available from the BEAST2 releases web page.
The BEAST 2 source code is available from the GitHub repository, which produces the latest cutting edge jar file here: beast.jar.
XML reference
The XML reference is available in the online manual.
Previous releases and version history
Previous releases and version history are available on the BEAST2 releases web page.
Version 2
BEAST 2 is a rewrite of BEAST 1.x, placing a greater emphasis on modularity. This makes it easier to extend BEAST 2 via its package system. As a result, BEAST 2 has rapidly acquired the ability to perform a diverse array of model-based analyses. For a comparison of features/models currently available in BEAST 2 with those currently implemented in BEAST 1, refer to this features table.
Getting Started
As BEAST 2 is such a large and complicated application, first-time users may find coming to grips with the program and its capabilities a daunting task. We therefore encourage you to perform the following:
- Familiarise yourself with the terminology used by BEAST 2 users and developers.
- Work through the available tutorials, particularly those applicable to your data.
- Join the users mailing list by visiting the beast-users group or sending an email to beast-users+subscribe@googlegroups.com. This list is used to announce new versions and to advise users about bugs and other problems.
- Attend the Taming the BEAST workshop.
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After completing these introductory steps, you’ll be well equipped to dive into the BEAST 2 Book.
BEAST 2 Packages
In BEAST 2, many models and analysis methods are implemented as BEAST 2 Packages. This means that the package is developed and maintained separately to BEAST 2 itself. To access these methods, you must download the corresponding packages in addition to BEAST 2. This is made easy by the BEAST 2 Package Manager, which is part of BEAST 2’s graphical user interface. See the Managing Packages page for details.
A list of known currently-available packages is provided in the BEAST 2/BEAST 1 feature comparison table.
Dealing with Problems and Performance Issues
While we aim to make using BEAST 2 a pleasant experience, problems do sometimes arise. In such cases, the following, please review the following information:
- An explanation of error messages and their meanings.
- The list of frequently asked questions (FAQ).
For performance-related issues, refer to this handy list of suggestions for improving performance.
Package Development
BEAST 2 is designed to be extended. Prospective package developers should refer to the Package Development Guide.
Who develops BEAST?
BEAST 2 is developed by a team of scientists around the world. This web site is managed by the Centre for Computational Evolution.
So far we have discussed Trojan horse viruses’ characteristics and how to protect your computer from contracting a Trojan horse virus, I’d like to discuss another example of a Trojan horse virus named Beast.
In 2002, Beast was created. It was a Windows-based backdoorTrojan horse, more commonly known in the underground hacking community as a Remote Administration Tool or RAT.
It can affect Windows versions 95 to XP, and was created by Tataye in 2002. It became very popular due to its unique features that used the typical client-server model (where the client would be under operation by the attacker and the server is what would infect the victim).
Beast was one of the first Trojans to feature a reverse connection to its victims; that is once it was established, the hacker was able to completely control the infected computer. It mainly attacked these three sites:
- C:Windowsmsagentms****.com (Size ranging from 30KB to 49KB)
- C:WindowsSystem32ms****.com (Size ranging from 30KB to 49KB)
- C:Windowsdxdgns.dll or C:WindowsSystem32dxdgns.dll (Location dependent on attacker’s choice)
It was using the injection method to inject viruses into specific process, commonly “explorer.exe” (Windows Explorer), “iexplore.exe” (Internet Explorer), or “msnmsgr.exe” (MSN Messenger) to steal information and give control to its author of your computer (K).
With Windows XP, you could remove the three files listed above in safe mode with system restore turned off and then you could disinfect the system.
Beast came in with a built in firewall by passer and had the ability to end anti- virus or firewall processes.
Another feature of Beast was that it had a binder feature that could be used to join two or more files together and then change the icon. Once connected to the victim Beast could manipulate files, terminate or execute services, applications, and processes managers; get access to stored passwords, power options (turn on/off, crash, reboot), and even chat with the client they were attacking (Beast).
Sources:
“Beast (Trojan Horse).” Wikipedia. Wikimedia Foundation, 21 Apr. 2014. Web. 22 Apr. 2014.
K, Rajnish. “Top 10 Most Dangerous Computer Viruses of the Decade Updated 2012.” Tech Twisted Technology Blogging. N.p., 20f Feb. 2012. Web. 22 Apr. 2014.